Index

C

canSAS

Common Display problems Courses

D

Data naming convention Introduction QIS QRS USAXS

DataBrowser additions Display problems Check for display area, [1] High-res displays Small displays, [1]

E

Error caused by missing HDF5 xop - Igor 8 ONLY

F

Folder name length (Nika) Form Factors CoreShell CoreShell Cylinder CoreShell precipitate CoreShellShell Cylinder CylinderAR, [1] Fractal Aggregate Integrated Spheroid Janus Micelle rectangular Parallelepiped Sphere w HS Loc Mono Sq Spheroid Unified Disk Unified Rod Unified Rod AR Unified Sphere User

G

Github Graph right click menu addition

Graphical Interface Panel scaling

H

HDF5 data files HDF5 error HDF5 files

HDF5OpenFile error Help Hermans orientational parameter

I

Igor 6.37 Igor 7.08 Import data ASCII SAXS ASCII WAXS or other canSAS Nexus canSAS XML Indra Collected data arrangement, [1] Data naming systems Import USAXS/SAXS/WAXS data Introduction Matilda automatic data reduction Merge USAXS/SAXS/WAXS data Merged data types Reduce SAXS data Reduce USAXS data Reduce USAXS flyscan data Reduce USAXS step scan data Reduce WAXS data Sample plate survey SAXS data reduction SAXS data reduction configuration SAXS data type Switch Nika configurations USAXS data collection USAXS data type USAXS flyscan data reduction USAXS step scan data reduction USAXS-SAXS data merge USAXS/SAXS/WAXS data description USAXS/SAXS/WAXS HDF5 files WAXS data reduction WAXS data reduction panel WAXS data type Indra manual input image ADSC ASCII binary Bruker CCD BSL BSRC DND edf FITS Fuji image plate GE binary HDF5 Igor binary wave mp/ascii mp/bin mpa mpa/Univ of Cincinnati Nexus NxSAS Pilatus Raxis Rigaku SMART SSRL tiff TPA WinView

Installation Irena Analyze results Anisotropy analysis bioSAXS average bioSAXS import ASCII data bioSAXS PDDF and molecular weight Close all panels Configure defaults Create QRS structure Data manipulation I Data manipulation II Data manipulation III Data mining Data selection controls Desmearing Display 3D data Do not restore panel sizes Evaluate size distributions Export data FAQ Form and structure factors Form factors Genetic optimization Import data Import POV or PDB files Introduction Load packages Logging feature Menu items Merge 2 data sets Metadata Browser Multi sample plotting tool MultiData selection controls Open manual Panel position and size restore Panel size Plotting tool I Plotting tool II Q resolution Scripting tool Simple Fits Size distribution System specific models Units Unload packages Update check WAXS fitting XOP use Irena manual

M

Missing controls on Panels Missing xop error model analytical models - obsolete Ciccariello–Benedetti Debye-Bueche Form Factors Fractal Guinier-Porod Hermans Lamellar structures Mass fractal aggregate MaxEnt Maximum entropy method Modeling Modeling Populations models Modified Hermans Pair distance distribution function PDF Reflectivity Regularization method size distribution small-angle diffraction Structure Factors TNNLS Total non-negative least square method Treubner-Strey Two phase solid Unified Born-Green Unified Fit User Form Factor

N

Name trimming (Nika) Nexus file format Nexus files Nexus standard Nika Batch processing Beam center Bottom Controls Calibration Configure defaults Create movie Detector tilts Distance calibration Do not restore panel sizes Export data Extend functionality Extend lookup functions Flood field Geometry refinement image Statistics Input 2D data types Instrument support Introduction Live processing Load packages Main panel Mask Multiple configurations Nexus files Nexus GUI Output data Panel size Q-resolution Sample name Sample to detector distance Sample-detector distance Selecting data Standard calibration Tabbed controls Uncertainty Units Unload packages Update check

Nika dark Nika data name Nika Empty/Blank Nika Export ASCII Nika Export data Nika Export Nexus Nika Fix background Oversubtraction Nika Grazing incidence geometry Nika instrument support 12ID-B instrument support 12ID-C instrument support 9ID-C instrument support ALS RSoXS instrument support APS 5ID DND SAXS/WAXS instrument support SMI NSLS-II instrument support SSRL Mat SAXS instrument support TPA instrument support Nika Line profile Nika lookup functions Metadata Text file Wave notes Nika Main parameters Nika manual Nika Mask Nika Polar transformation Nika polarization correction Nika Processing parameters Nika SAVE tab Nika Sector lineouts Nika Circular lineout Nika uncertainties NXcanSAS NXsas

P

Panel artifacts Panel scaling Powder diffraction Probability distributions Ardell Gauss Log-Normal LSW

Q

QIS names

QRS data type QRS names

R

Reading HDF5 files with non standard compression

Reading Igor 9 saved experiments in Igor 8

S

Sample name length (Nika) scale Scattering Contrast Calculator Anomalous Energy dependence Free el. approx. Neutrons Transmission Calculation Slit smeared data

Slit smearing Structure Factors DisorderedCrystal Hard Spheres HayerPenfoldMSA Interferences Interprecipitate Square Well Sticky hard Spheres subtract

U

USAXS instrument description

USAXS names USAXS naming system

W

WAXS

X

xop not loading (macOS)

Y

Youtube

Youtube channel